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Trans-eQTLs across different cancer types

In trans-eQTL analysis, we identified 231,210 eQTL−gene pairs at FDR < 0.05 in 33 cancer types for users to search or browse.

     

e.g., "PRAD"
e.g., "rs7231881"
e.g., "SMAD4"


     

Cancer type
SNP ID
SNP position (hg19)
Alleles (A/a)
Gene symbol
Gene position (hg19)
Beta
t-stat
p-valule
Display
ACC rs139726473 chr18:37102337 T/C PRHOXNB chr13:28552243-28562774:- 0.7 9.18 1.85E-12 Box Plot
ACC rs1397365 chr8:112815389 C/A KRT14 chr17:39738531-39743173:- 1.14 7.63 4.9E-10 Box Plot
ACC rs1397365 chr8:112815389 C/A KRT6C chr12:52862300-52867569:- 0.82 11.71 3.41E-16 Box Plot
ACC rs1397371 chr8:112847503 T/G KRT6C chr12:52862300-52867569:- 0.78 10.71 9.2E-15 Box Plot
ACC rs140125192 chr1:26804963 C/CGT TFDP3 chrX:132350697-132352376:- 1.01 10.06 8.31E-14 Box Plot
ACC rs140252244 chr16:49694131 A/AATGAATGAATGG PRHOXNB chr13:28552243-28562774:- 0.63 8.26 5.03E-11 Box Plot
ACC rs1407204 chr6:119289835 C/A ACTR3C chr7:149941005-150020814:- 1 7.67 4.17E-10 Box Plot
ACC rs140763583 chr3:128558215 A/G OR5V1 chr6:29323007-29399744:- 0.68 8.83 6.4E-12 Box Plot
ACC rs141009 chr17:39332430 G/T OR5V1 chr6:29323007-29399744:- -0.59 -7.88 1.95E-10 Box Plot
ACC rs141065252 chr18:37000097 T/G PRHOXNB chr13:28552243-28562774:- 0.61 7.81 2.56E-10 Box Plot
ACC rs141165836 chr18:37100524 A/C PRHOXNB chr13:28552243-28562774:- 0.7 9.18 1.85E-12 Box Plot
ACC rs141432372 chr6:9184057 A/T DUPD1 chr10:76797594-76818272:- 1.01 7.52 7.26E-10 Box Plot
ACC rs141551598 chr2:194937470 G/T PRHOXNB chr13:28552243-28562774:- 0.72 8.92 4.69E-12 Box Plot
ACC rs141582737 chr2:224229426 T/G PRHOXNB chr13:28552243-28562774:- 0.59 7.99 1.3E-10 Box Plot
ACC rs141616127 chr17:51542257 T/G PRHOXNB chr13:28552243-28562774:- 0.67 10.22 4.93E-14 Box Plot